Detail information of GWHGAAZE002525


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002264437.13.2798E-129PREDICTED: probable glutathione S-transferase [Vitis vinifera]
COGYP_007067680.12E-24glutathione S-transferase
Swissprottr|Q03666|GSTX4_TOBAC6E-120Probable glutathione S-transferase
trEMBLtr|F6HR78|F6HR78_VITVI1E-129Putative uncharacterized protein {ECO:0000313|EMBL:CCB57186.1}
TAIR10AT1G78380.12E-89glutathione S-transferase TAU 19

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene8060305580604510-
GWHAAZE00000001mRNA8060305580604510-
GWHAAZE00000001exon8060305580603396-
GWHAAZE00000001exon8060419680604510-
GWHAAZE00000001CDS8060419680604510-
GWHAAZE00000001CDS8060305580603396-
Transcript Sequence

Network for GWHGAAZE002525

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0012map00982 Drug metabolism - cytochrome P450
map00980 Metabolism of xenobiotics by cytochrome P450
map00983 Drug metabolism - other enzymes
map00480 Glutathione metabolism
map04212 Longevity regulating pathway - worm
GO:0005515 protein binding GOslim:molecular_function
map01100 Metabolic pathways


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02798.21GST_N9761.20E-16
PF13410.7GST_C_21241885.00E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.430
SRR3591706second leaf0.419
SRR3591707mature leaf2.334
SRR3591708Shoot apex0.776
SRR3591709Stem2.547
SRR3591710White floral bud0.712
SRR3591711White flower2.871
SRR3591712Green floral bud0.449
SRR3591713Yellow flower2.873
SRP173429 SRR8316895Juvenile bud stage 2.130
SRR8316896Juvenile bud stage 1.842
SRR8316897Juvenile bud stage 0.423
SRR8316894Third green stage 0.138
SRR8316900Third green stage 0.320
SRR8316901Third green stage 0.599
SRR8316898Complete white stage 0.094
SRR8316899Complete white stage 0.500
SRR8316903Complete white stage 0.392
SRR8316902Silver flowering stage1.424
SRR8316904Silver flowering stage1.499
SRR8316905Silver flowering stage1.347
SRR8316906Gold flowering stage 5.745
SRR8316907Gold flowering stage 3.963
SRR8316908Gold flowering stage 1.336
SRP132670SRR6706286Control0.097
SRR6706287Light intensity 50%0.033
SRR6706288Light intensity 20%0.111
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.862
CNS0095593Slightly white alabastrum(diploid) 20.521
CNS0095594Slightly white alabastrum(diploid) 31.800
CNS0095595Whole white alabastrum(diploid) 20.716
CNS0095596Whole white alabastrum(diploid) 30.357
CNS0095597Whole white alabastrum(diploid) 40.195
CNS0095598Silvery flower (diploied) 110.340
CNS0095599Silvery flower (diploied) 219.356
CNS0095600Silvery flower (diploied) 311.478
CNS0095601Golden flower (diploid) 157.741
CNS0095602Golden flower (diploid) 231.492
CNS0095603Golden flower (diploid) 331.667
CNS0095604Slightly white alabastrum(tetraploid) 10.746
CNS0095605Slightly white alabastrum(tetraploid) 20.745
CNS0095606Slightly white alabastrum(tetraploid) 30.665
CNS0095607Whole white alabastrum(tetraploid) 10.250
CNS0095608Whole white alabastrum(tetraploid) 20.272
CNS0095609Whole white alabastrum(tetraploid) 30.212
CNS0095610Silvery flower (tetraploid) 10.835
CNS0095611Silvery flower (tetraploid) 20.298
CNS0095612Silvery flower (tetraploid) 30.677
CNS0095613Golden flower (tetraploid) 10.726
CNS0095614Golden flower (tetraploid) 20.671
CNS0095615Golden flower (tetraploid) 30.103
CRA001975CRR073297Stem 10.141
CRR073298Stem 20.148
CRR073299Stem 30.127
CRR073300Leaf 10.111
CRR073301Leaf 20.135
CRR073302Leaf 30.031
CRR073303Juvenile bud 10.387
CRR073304Juvenile bud 20.160
CRR073305Juvenile bud 30.202
CRR073306Third green 10.226
CRR073307Third green 20.548
CRR073308Third green 30.396
CRR073309Second white 12.979
CRR073310Second white 21.348
CRR073311Second white 31.722
CRR073312Silver flowering 10.814
CRR073313Silver flowering 21.760
CRR073314Silver flowering 31.839
CRR073315Gold flowering 13.703
CRR073316Gold flowering 21.921
CRR073317Gold flowering 31.681
CRR073318Tawny withering 112.349
CRR073319Tawny withering 218.970
CRR073320Tawny withering 320.875