Detail information of GWHGAAZE002368


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP10753.11.3427E-133unnamed protein product [Coffea canephora]
COGYP_001156054.12E-48carboxymethylenebutenolidase
trEMBLtr|A0A068UT22|A0A068UT22_COFCA5E-134Coffea canephora DH200=94 genomic scaffold, scaffold_47 {ECO:0000313|EMBL:CDP10753.1}
TAIR10AT2G32520.12E-102alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene7699340076996770-
GWHAAZE00000001mRNA7699340076996770-
GWHAAZE00000001exon7699662876996770-
GWHAAZE00000001exon7699640176996530-
GWHAAZE00000001exon7699549576995686-
GWHAAZE00000001exon7699340076993609-
GWHAAZE00000001CDS7699662876996770-
GWHAAZE00000001CDS7699640176996530-
GWHAAZE00000001CDS7699549576995686-
GWHAAZE00000001CDS7699340076993609-
Transcript Sequence

Network for GWHGAAZE002368

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01738.19DLH22211.10E-57
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01061E3.1.1.45 Metabolic pathways map01100
Microbial metabolism in diverse environmentsmap01120
Fluorobenzoate degradationmap00364
Chlorocyclohexane and chlorobenzene degradationmap00361
Toluene degradationmap00623

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf236.821
SRR3591706second leaf137.073
SRR3591707mature leaf168.929
SRR3591708Shoot apex170.959
SRR3591709Stem216.676
SRR3591710White floral bud101.537
SRR3591711White flower110.742
SRR3591712Green floral bud203.922
SRR3591713Yellow flower58.523
SRP173429 SRR8316895Juvenile bud stage 128.268
SRR8316896Juvenile bud stage 183.191
SRR8316897Juvenile bud stage 83.114
SRR8316894Third green stage 72.099
SRR8316900Third green stage 267.405
SRR8316901Third green stage 249.901
SRR8316898Complete white stage 80.155
SRR8316899Complete white stage 307.363
SRR8316903Complete white stage 93.382
SRR8316902Silver flowering stage43.946
SRR8316904Silver flowering stage39.535
SRR8316905Silver flowering stage19.238
SRR8316906Gold flowering stage 59.330
SRR8316907Gold flowering stage 62.698
SRR8316908Gold flowering stage 76.762
SRP132670SRR6706286Control233.155
SRR6706287Light intensity 50%233.089
SRR6706288Light intensity 20%264.435
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1240.223
CNS0095593Slightly white alabastrum(diploid) 2277.244
CNS0095594Slightly white alabastrum(diploid) 3249.079
CNS0095595Whole white alabastrum(diploid) 2246.788
CNS0095596Whole white alabastrum(diploid) 3241.677
CNS0095597Whole white alabastrum(diploid) 4207.585
CNS0095598Silvery flower (diploied) 1193.467
CNS0095599Silvery flower (diploied) 2191.212
CNS0095600Silvery flower (diploied) 3180.921
CNS0095601Golden flower (diploid) 1190.443
CNS0095602Golden flower (diploid) 2162.006
CNS0095603Golden flower (diploid) 3172.719
CNS0095604Slightly white alabastrum(tetraploid) 1287.569
CNS0095605Slightly white alabastrum(tetraploid) 2255.427
CNS0095606Slightly white alabastrum(tetraploid) 3412.355
CNS0095607Whole white alabastrum(tetraploid) 1185.680
CNS0095608Whole white alabastrum(tetraploid) 2177.325
CNS0095609Whole white alabastrum(tetraploid) 3322.587
CNS0095610Silvery flower (tetraploid) 1243.682
CNS0095611Silvery flower (tetraploid) 2286.490
CNS0095612Silvery flower (tetraploid) 3223.972
CNS0095613Golden flower (tetraploid) 1168.223
CNS0095614Golden flower (tetraploid) 2192.273
CNS0095615Golden flower (tetraploid) 376.185
CRA001975CRR073297Stem 1215.572
CRR073298Stem 2219.127
CRR073299Stem 3257.062
CRR073300Leaf 1258.979
CRR073301Leaf 2276.874
CRR073302Leaf 3367.405
CRR073303Juvenile bud 1352.787
CRR073304Juvenile bud 2311.317
CRR073305Juvenile bud 3366.843
CRR073306Third green 1107.782
CRR073307Third green 2102.733
CRR073308Third green 399.039
CRR073309Second white 1109.536
CRR073310Second white 259.783
CRR073311Second white 338.107
CRR073312Silver flowering 138.466
CRR073313Silver flowering 253.888
CRR073314Silver flowering 333.877
CRR073315Gold flowering 1203.710
CRR073316Gold flowering 2205.063
CRR073317Gold flowering 3212.914
CRR073318Tawny withering 1214.929
CRR073319Tawny withering 2188.880
CRR073320Tawny withering 3238.502