Gene detail

Detail information of GWHGAAZE002264

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011047494.1	1.82192E-76	PREDICTED: myb-related protein Myb4-like [Populus euphratica]
Swissprot	tr\|Q7XBH4\|MYB4_ORYSJ	4E-53	Myb-related protein Myb4
trEMBL	tr\|A0A067JXL7\|A0A067JXL7_JATCU	9E-76	Uncharacterized protein {ECO:0000313\|EMBL:KDP24725.1}
TAIR10	AT5G16770.2	3E-44	myb domain protein 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	74116356	74117739	-
GWHAAZE00000001	mRNA	74116356	74117739	-
GWHAAZE00000001	exon	74116356	74116905	-
GWHAAZE00000001	exon	74117266	74117395	-
GWHAAZE00000001	exon	74117607	74117739	-
GWHAAZE00000001	CDS	74117607	74117739	-
GWHAAZE00000001	CDS	74117266	74117395	-
GWHAAZE00000001	CDS	74116356	74116905	-

Transcript Sequence
>GWHTAAZE002268 ATGGGGAGAAAACCTAGAATTGATGAAAATGGAATTAAGAAAGGGGCGTGGAGTGAAGAGGAAGATGATATGTTAAGAGCTTATGTTGAAAGATATGGCCATTGGAATTGGCGTCAACTTCCCAAATTCGCTGGTTTATCTAGATGCGGAAAGAGTTGCAGGCTTCGATGGCTAAATTATCTTCAACAAAATGTTAAAAGAGGAAACTACACAGAAGAAGAGGATGATCTCATTTTGAAATTACACGCCGAACTTGGAAATAAATGGTCGATTATTGCTGCAAAACTACCGGGAAGAACTGACAATGAAATCAAAAATCACTGGCACTCTCATCTAAAGAAACGTGCAACTCAAACTTCAACACTATCCAATAGTAATGAATTAACACAAGAAAACATAGTATCTGACGTTCCGTATCAGCAAAGTTCAGAAAACCTTTCATTGTTTTCTGAATCATCTTCCGGTGGGCTCTCTTCTAACTACGATTCACTGGATTCTTATGCTCAATCAAATGAGACGGAGCAATGTATTGAAACATACAATCTAGAAGCCATGAAAGAGAATGGTTCGACACAAGGAAATTTTGAGGATTTACTTTCAAATGGCATCAACTGGTTCGCAGAAAACAGTTTCACTTCGTTTGAGTACTCCATTGGAGATTTCTGGGCTGAACCGTTCTCGGTGGATGAAACATATCCTCAAAGTACTTTTTTATCGACCTCAGCAGGGACAGGCTTTATATCACCTTTGGTTTCGTACAACAACGATAACATTGAGTTCTTTGATGAAATATTATTCCAGGAATTGCTCTAA

Network for GWHGAAZE002264

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.32	Myb_DNA-binding	14	61	3.70E-13
PF00249.32	Myb_DNA-binding	67	112	6.10E-16
PF08263.13	LRRNT_2	41	92	8.20E-05
PF13855.7	LRR_8	633	691	2.90E-10
PF00069.26	Pkinase	817	1074	2.60E-46

Protein Sequence

>GWHPAAZE011216
MYIKNNTMGSLAFEKPLPLLSFVLFIVLFSSPNIVSSSVEEANALFKWKSTLQRIPKPMQSSWSLLPHKSTNSSSNQKTTVSPCTWFGVSCNSEGSVNRLNLSQSNVKGTLYDLSFKLFPNLEYIDLYINELLIDLSENLLFGSIPSSFGNLSNLTFLQLFSNQLTGSIPLELGNLKLLRTMALSTNNLSGSIPPSLGDLESLSFLSLSNNLLSSSIPSSIDNLSNLANLYLYKNKLSGTIPPEIGNLTNVVMIDLSENLLFGSIPSSFGNLSNLTLLQLFSNQLSGSIPLELGNLKLLRTMDLSTNSLSGSIPPSLGDLESLSYLSLSNNLLSSSIPSSIDNLSNLANLYLYKNKLSGTIPPEIGNLTNVVMIDLSENLLFGSIPSSFGNLSNLTLLQLFSNQLSGSIPLELGNLKLLRTMDLSTNNLSGYFPKEVCTGGRLQRLIVSHNSIVGPIPKSLRNCSSLIRVRLEGNHFTGNISEVFGVYPNLNLMYLSDNKFYGHLSDNWSKCKKLKDFQIVRNNITGGIPLEFGSSNFVVLDISSNKLVGEIPKEFGKLKHMLKLVLSNNKLYGNIPQELGSLIELLELDLSKNRLNGSIPGNLSNCLNLFSLSLSDNNLSQDIPVEMSNLLHLSTLDLSGNSLTGEIPSQIRSLQSLEKLNISRNKLSGEIPNAFNDMTALVYIDISYNEVYGPIPNSKVFVNASIQILRGNKGLCGNVKGLQHCANPFVVSKHKQKMSHKLVLIVVLPLIVSLLLLCAFILFFIIYDRRRRNKRMSKVEETDAQDHDIFSILSFDGKAMYKEILKATNDFDFQYCIGQGGFGDVYKAKMQLGNIVAVKKLHSLSKIVDRKAFENEVKALTEIRHRNIVKLHGFCSHAQNSFLVYDYLEKGSLAEILNKEEEAQKLDWQKRVNIIKRVAHALSYMHHDCSPPIIHRDISSKNILLDSEYEACVSDFGTAKILNLDSSNWSALAGTYGYIAPEFAYTMKVTEKCDVYSFGVLSLEVLRGKHPGDYIASLLSQSSEDNQLKDALDERLPPPSVEEEKLLISIVILAKACLHDNPQSRPTMHDVSQTLSIKTLTS

Gene family

Gene family	subfamily
Transcription Factors Family	MYB
Protein Kinases Family	RLK-Pelle_LRR-XI-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005515	molecular_function	protein binding
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.818
	SRR3591706	second leaf	0.139
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.175
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.087
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.104
SRP173429	SRR8316895	Juvenile bud stage	0.107
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.132
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.087
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.004
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.010
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.068
	CNS0095593	Slightly white alabastrum(diploid) 2	0.524
	CNS0095594	Slightly white alabastrum(diploid) 3	0.276
	CNS0095595	Whole white alabastrum(diploid) 2	0.294
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.114
	CNS0095598	Silvery flower (diploied) 1	0.091
	CNS0095599	Silvery flower (diploied) 2	0.262
	CNS0095600	Silvery flower (diploied) 3	0.016
	CNS0095601	Golden flower (diploid) 1	0.046
	CNS0095602	Golden flower (diploid) 2	0.239
	CNS0095603	Golden flower (diploid) 3	0.011
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.120
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.020
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.016
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.026
	CRR073309	Second white 1	0.024
	CRR073310	Second white 2	0.017
	CRR073311	Second white 3	0.025
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.022
	CRR073314	Silver flowering 3	0.024
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.625
	CRR073320	Tawny withering 3	0.256