Detail information of GWHGAAZE001831


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011082926.13.5256E-170PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 24-like isoform X1 [Sesamum indicum]
COGYP_761292.12E-13putative licheninase
Swissprottr|Q38857|XTH22_ARATH3E-135Xyloglucan endotransglucosylase/hydrolase protein 22 (Precursor)
trEMBLtr|A0A067K9Z8|A0A067K9Z8_JATCU1E-161Xyloglucan endotransglucosylase/hydrolase {ECO:0000256|RuleBase:RU361120}
TAIR10AT5G57560.14E-104Xyloglucan endotransglucosylase/hydrolase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene6229138562292508-
GWHAAZE00000001mRNA6229138562292508-
GWHAAZE00000001exon6229138562291787-
GWHAAZE00000001exon6229190862292101-
GWHAAZE00000001exon6229222762292508-
GWHAAZE00000001CDS6229222762292508-
GWHAAZE00000001CDS6229190862292101-
GWHAAZE00000001CDS6229138562291787-
Transcript Sequence

Network for GWHGAAZE001831

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00722.22Glyco_hydro_16312117.80E-61
PF06955.13XET_C2452872.80E-18
PF00628.30PHD11424.70E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
K02603ORC1 Cell cycle map04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113

Gene Ontology

GO term OntologyName
GO:0010411biological_processxyloglucan metabolic process
GO:0042546biological_processcell wall biogenesis
GO:0006073biological_processcellular glucan metabolic process
GO:0005975biological_processcarbohydrate metabolic process
GO:0005618cellular_componentcell wall
GO:0048046cellular_componentapoplast
GO:0016762molecular_functionxyloglucan:xyloglucosyl transferase activity
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf36.374
SRR3591706second leaf0.400
SRR3591707mature leaf0.279
SRR3591708Shoot apex0.975
SRR3591709Stem32.181
SRR3591710White floral bud6.444
SRR3591711White flower14.531
SRR3591712Green floral bud1.325
SRR3591713Yellow flower16.074
SRP173429 SRR8316895Juvenile bud stage 1.485
SRR8316896Juvenile bud stage 1.030
SRR8316897Juvenile bud stage 15.504
SRR8316894Third green stage 0.532
SRR8316900Third green stage 2.895
SRR8316901Third green stage 9.403
SRR8316898Complete white stage 1.455
SRR8316899Complete white stage 9.161
SRR8316903Complete white stage 1.957
SRR8316902Silver flowering stage12.655
SRR8316904Silver flowering stage5.751
SRR8316905Silver flowering stage3.663
SRR8316906Gold flowering stage 26.697
SRR8316907Gold flowering stage 31.509
SRR8316908Gold flowering stage 16.809
SRP132670SRR6706286Control2.966
SRR6706287Light intensity 50%5.610
SRR6706288Light intensity 20%1.507
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.011
CNS0095593Slightly white alabastrum(diploid) 22.233
CNS0095594Slightly white alabastrum(diploid) 31.644
CNS0095595Whole white alabastrum(diploid) 20.552
CNS0095596Whole white alabastrum(diploid) 30.429
CNS0095597Whole white alabastrum(diploid) 40.616
CNS0095598Silvery flower (diploied) 124.407
CNS0095599Silvery flower (diploied) 211.353
CNS0095600Silvery flower (diploied) 336.352
CNS0095601Golden flower (diploid) 16.771
CNS0095602Golden flower (diploid) 227.819
CNS0095603Golden flower (diploid) 324.710
CNS0095604Slightly white alabastrum(tetraploid) 10.384
CNS0095605Slightly white alabastrum(tetraploid) 20.357
CNS0095606Slightly white alabastrum(tetraploid) 30.201
CNS0095607Whole white alabastrum(tetraploid) 10.491
CNS0095608Whole white alabastrum(tetraploid) 20.233
CNS0095609Whole white alabastrum(tetraploid) 30.096
CNS0095610Silvery flower (tetraploid) 13.479
CNS0095611Silvery flower (tetraploid) 20.595
CNS0095612Silvery flower (tetraploid) 318.348
CNS0095613Golden flower (tetraploid) 111.971
CNS0095614Golden flower (tetraploid) 24.111
CNS0095615Golden flower (tetraploid) 36.514
CRA001975CRR073297Stem 11.171
CRR073298Stem 20.054
CRR073299Stem 30.272
CRR073300Leaf 12.948
CRR073301Leaf 27.033
CRR073302Leaf 32.537
CRR073303Juvenile bud 15.873
CRR073304Juvenile bud 228.149
CRR073305Juvenile bud 313.258
CRR073306Third green 138.493
CRR073307Third green 242.892
CRR073308Third green 341.643
CRR073309Second white 123.603
CRR073310Second white 222.443
CRR073311Second white 333.708
CRR073312Silver flowering 1120.696
CRR073313Silver flowering 292.952
CRR073314Silver flowering 367.388
CRR073315Gold flowering 13.716
CRR073316Gold flowering 210.687
CRR073317Gold flowering 33.724
CRR073318Tawny withering 16.196
CRR073319Tawny withering 210.869
CRR073320Tawny withering 35.869