Detail information of GWHGAAZE001724


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011026211.14.6575E-89PREDICTED: transmembrane protein 56-B-like [Populus euphratica]
trEMBLtr|A0A061DLZ9|A0A061DLZ9_THECC3E-87TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein isoform 2 {ECO:0000313|EMBL:EOX93096.1} (Fragment)
TAIR10AT1G31300.23E-62TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene5875328258755587-
GWHAAZE00000001mRNA5875328258755587-
GWHAAZE00000001exon5875547458755587-
GWHAAZE00000001exon5875471258754800-
GWHAAZE00000001exon5875449258754630-
GWHAAZE00000001exon5875362258753696-
GWHAAZE00000001exon5875328258753425-
GWHAAZE00000001CDS5875547458755587-
GWHAAZE00000001CDS5875471258754800-
GWHAAZE00000001CDS5875449258754630-
GWHAAZE00000001CDS5875362258753696-
GWHAAZE00000001CDS5875328258753425-
Transcript Sequence

Network for GWHGAAZE001724

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.16WRKY2463021.20E-25
PF03106.16WRKY4194391.90E-06
PF03798.17TRAM_LAG1_CLN8641811.30E-16
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
K13424WRKY33 MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0016021cellular_componentintegral component of membrane
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0043565molecular_functionsequence-specific DNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.272
SRR3591706second leaf2.953
SRR3591707mature leaf11.784
SRR3591708Shoot apex2.633
SRR3591709Stem12.899
SRR3591710White floral bud14.853
SRR3591711White flower22.358
SRR3591712Green floral bud8.954
SRR3591713Yellow flower24.076
SRP173429 SRR8316895Juvenile bud stage 5.638
SRR8316896Juvenile bud stage 13.514
SRR8316897Juvenile bud stage 4.870
SRR8316894Third green stage 3.723
SRR8316900Third green stage 5.730
SRR8316901Third green stage 6.466
SRR8316898Complete white stage 4.264
SRR8316899Complete white stage 11.247
SRR8316903Complete white stage 5.670
SRR8316902Silver flowering stage4.041
SRR8316904Silver flowering stage7.090
SRR8316905Silver flowering stage2.825
SRR8316906Gold flowering stage 18.977
SRR8316907Gold flowering stage 10.181
SRR8316908Gold flowering stage 14.715
SRP132670SRR6706286Control5.432
SRR6706287Light intensity 50%5.317
SRR6706288Light intensity 20%5.495
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.027
CNS0095593Slightly white alabastrum(diploid) 29.467
CNS0095594Slightly white alabastrum(diploid) 38.774
CNS0095595Whole white alabastrum(diploid) 25.871
CNS0095596Whole white alabastrum(diploid) 37.269
CNS0095597Whole white alabastrum(diploid) 48.801
CNS0095598Silvery flower (diploied) 19.736
CNS0095599Silvery flower (diploied) 26.735
CNS0095600Silvery flower (diploied) 316.222
CNS0095601Golden flower (diploid) 19.855
CNS0095602Golden flower (diploid) 219.484
CNS0095603Golden flower (diploid) 318.340
CNS0095604Slightly white alabastrum(tetraploid) 14.147
CNS0095605Slightly white alabastrum(tetraploid) 23.475
CNS0095606Slightly white alabastrum(tetraploid) 35.236
CNS0095607Whole white alabastrum(tetraploid) 15.493
CNS0095608Whole white alabastrum(tetraploid) 25.880
CNS0095609Whole white alabastrum(tetraploid) 39.470
CNS0095610Silvery flower (tetraploid) 128.848
CNS0095611Silvery flower (tetraploid) 248.752
CNS0095612Silvery flower (tetraploid) 325.053
CNS0095613Golden flower (tetraploid) 114.651
CNS0095614Golden flower (tetraploid) 221.136
CNS0095615Golden flower (tetraploid) 349.419
CRA001975CRR073297Stem 19.113
CRR073298Stem 213.570
CRR073299Stem 311.671
CRR073300Leaf 13.527
CRR073301Leaf 24.260
CRR073302Leaf 32.478
CRR073303Juvenile bud 14.311
CRR073304Juvenile bud 22.690
CRR073305Juvenile bud 33.447
CRR073306Third green 12.484
CRR073307Third green 23.868
CRR073308Third green 33.082
CRR073309Second white 110.440
CRR073310Second white 29.070
CRR073311Second white 35.376
CRR073312Silver flowering 16.940
CRR073313Silver flowering 26.802
CRR073314Silver flowering 33.483
CRR073315Gold flowering 16.178
CRR073316Gold flowering 27.219
CRR073317Gold flowering 37.330
CRR073318Tawny withering 13.338
CRR073319Tawny withering 28.094
CRR073320Tawny withering 33.786