Detail information of GWHGAAZE001526


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP20673.13.5474E-147hypothetical protein JCGZ_21144 [Jatropha curcas]
Swissprottr|G3CCC1|CABS_TOBAC6E-122Cis-abienol synthase, chloroplastic (Precursor)
trEMBLtr|A0A067JD40|A0A067JD40_JATCU1E-147Uncharacterized protein {ECO:0000313|EMBL:KDP20673.1}
TAIR10AT1G79460.17E-81Terpenoid cyclases/Protein prenyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene4993682849951806-
GWHAAZE00000001mRNA4993682849951806-
GWHAAZE00000001exon4995174349951806-
GWHAAZE00000001exon4995019949950379-
GWHAAZE00000001exon4994982349950025-
GWHAAZE00000001exon4994926749949387-
GWHAAZE00000001exon4994901549949112-
GWHAAZE00000001exon4994871249948755-
GWHAAZE00000001exon4994830549948414-
GWHAAZE00000001exon4994773949947837-
GWHAAZE00000001exon4993889749939115-
GWHAAZE00000001exon4993820949938359-
GWHAAZE00000001exon4993737549937623-
GWHAAZE00000001exon4993682849937133-
GWHAAZE00000001five_prime_UTR4995174349951806-
GWHAAZE00000001five_prime_UTR4995034549950379-
GWHAAZE00000001CDS4995019949950344-
GWHAAZE00000001CDS4994982349950025-
GWHAAZE00000001CDS4994926749949387-
GWHAAZE00000001CDS4994901549949112-
GWHAAZE00000001CDS4994871249948755-
GWHAAZE00000001CDS4994830549948414-
GWHAAZE00000001CDS4994773949947837-
GWHAAZE00000001CDS4993889749939115-
GWHAAZE00000001CDS4993820949938359-
GWHAAZE00000001CDS4993737549937623-
GWHAAZE00000001CDS4993682849937133-
Transcript Sequence

Network for GWHGAAZE001526

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01397.22Terpene_synth682031.40E-29
PF03936.17Terpene_synth_C2525217.30E-46
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04121E4.2.3.19 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Diterpenoid biosynthesismap00904

Gene Ontology

GO term OntologyName
GO:0000287molecular_functionmagnesium ion binding
GO:0010333molecular_functionterpene synthase activity
GO:0016829molecular_functionlyase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.063
SRR3591709Stem0.000
SRR3591710White floral bud1.982
SRR3591711White flower0.090
SRR3591712Green floral bud1.942
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.012
SRR8316896Juvenile bud stage 0.035
SRR8316897Juvenile bud stage 0.006
SRR8316894Third green stage 0.024
SRR8316900Third green stage 2.757
SRR8316901Third green stage 2.254
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.020
SRR8316904Silver flowering stage0.086
SRR8316905Silver flowering stage0.056
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control1.044
SRR6706287Light intensity 50%1.180
SRR6706288Light intensity 20%0.995
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.665
CNS0095593Slightly white alabastrum(diploid) 23.031
CNS0095594Slightly white alabastrum(diploid) 32.657
CNS0095595Whole white alabastrum(diploid) 213.456
CNS0095596Whole white alabastrum(diploid) 314.973
CNS0095597Whole white alabastrum(diploid) 420.055
CNS0095598Silvery flower (diploied) 10.041
CNS0095599Silvery flower (diploied) 20.196
CNS0095600Silvery flower (diploied) 30.173
CNS0095601Golden flower (diploid) 10.043
CNS0095602Golden flower (diploid) 20.052
CNS0095603Golden flower (diploid) 30.049
CNS0095604Slightly white alabastrum(tetraploid) 15.209
CNS0095605Slightly white alabastrum(tetraploid) 25.206
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 120.659
CNS0095608Whole white alabastrum(tetraploid) 221.764
CNS0095609Whole white alabastrum(tetraploid) 39.436
CNS0095610Silvery flower (tetraploid) 10.015
CNS0095611Silvery flower (tetraploid) 20.262
CNS0095612Silvery flower (tetraploid) 30.827
CNS0095613Golden flower (tetraploid) 10.039
CNS0095614Golden flower (tetraploid) 20.035
CNS0095615Golden flower (tetraploid) 30.590
CRA001975CRR073297Stem 10.158
CRR073298Stem 20.129
CRR073299Stem 30.000
CRR073300Leaf 11.590
CRR073301Leaf 20.702
CRR073302Leaf 30.103
CRR073303Juvenile bud 11.253
CRR073304Juvenile bud 20.923
CRR073305Juvenile bud 30.155
CRR073306Third green 10.259
CRR073307Third green 20.321
CRR073308Third green 30.120
CRR073309Second white 10.000
CRR073310Second white 20.012
CRR073311Second white 30.048
CRR073312Silver flowering 10.352
CRR073313Silver flowering 20.161
CRR073314Silver flowering 30.184
CRR073315Gold flowering 10.254
CRR073316Gold flowering 20.120
CRR073317Gold flowering 30.038
CRR073318Tawny withering 10.614
CRR073319Tawny withering 20.254
CRR073320Tawny withering 30.192