Detail information of GWHGAAZE001218


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011080408.10PREDICTED: uncharacterized protein LOC105163666 [Sesamum indicum]
trEMBLtr|W9SJ16|W9SJ16_9ROSA0Uncharacterized protein {ECO:0000313|EMBL:EXC10893.1}
TAIR10AT5G13500.32E-152Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000001gene2797780627981999-
GWHAAZE00000001mRNA2797780627981999-
GWHAAZE00000001exon2798158627981999-
GWHAAZE00000001exon2798000027980067-
GWHAAZE00000001exon2797970627979907-
GWHAAZE00000001exon2797904727979144-
GWHAAZE00000001exon2797886227978931-
GWHAAZE00000001exon2797860727978678-
GWHAAZE00000001exon2797780627977973-
GWHAAZE00000001CDS2798158627981999-
GWHAAZE00000001CDS2798000027980067-
GWHAAZE00000001CDS2797970627979907-
GWHAAZE00000001CDS2797904727979144-
GWHAAZE00000001CDS2797886227978931-
GWHAAZE00000001CDS2797860727978678-
GWHAAZE00000001CDS2797780627977973-
Transcript Sequence

Network for GWHGAAZE001218

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20782HPAT Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf35.145
SRR3591706second leaf22.946
SRR3591707mature leaf22.427
SRR3591708Shoot apex25.624
SRR3591709Stem52.690
SRR3591710White floral bud24.760
SRR3591711White flower32.003
SRR3591712Green floral bud24.799
SRR3591713Yellow flower34.741
SRP173429 SRR8316895Juvenile bud stage 23.750
SRR8316896Juvenile bud stage 34.025
SRR8316897Juvenile bud stage 17.455
SRR8316894Third green stage 11.388
SRR8316900Third green stage 28.356
SRR8316901Third green stage 28.216
SRR8316898Complete white stage 13.346
SRR8316899Complete white stage 37.751
SRR8316903Complete white stage 17.796
SRR8316902Silver flowering stage12.776
SRR8316904Silver flowering stage17.640
SRR8316905Silver flowering stage6.873
SRR8316906Gold flowering stage 32.318
SRR8316907Gold flowering stage 27.697
SRR8316908Gold flowering stage 36.503
SRP132670SRR6706286Control15.381
SRR6706287Light intensity 50%16.536
SRR6706288Light intensity 20%17.007
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.288
CNS0095593Slightly white alabastrum(diploid) 225.420
CNS0095594Slightly white alabastrum(diploid) 328.869
CNS0095595Whole white alabastrum(diploid) 218.865
CNS0095596Whole white alabastrum(diploid) 317.386
CNS0095597Whole white alabastrum(diploid) 419.843
CNS0095598Silvery flower (diploied) 121.153
CNS0095599Silvery flower (diploied) 221.479
CNS0095600Silvery flower (diploied) 326.134
CNS0095601Golden flower (diploid) 121.850
CNS0095602Golden flower (diploid) 229.261
CNS0095603Golden flower (diploid) 327.251
CNS0095604Slightly white alabastrum(tetraploid) 128.749
CNS0095605Slightly white alabastrum(tetraploid) 227.838
CNS0095606Slightly white alabastrum(tetraploid) 337.661
CNS0095607Whole white alabastrum(tetraploid) 123.869
CNS0095608Whole white alabastrum(tetraploid) 219.984
CNS0095609Whole white alabastrum(tetraploid) 326.350
CNS0095610Silvery flower (tetraploid) 132.816
CNS0095611Silvery flower (tetraploid) 226.139
CNS0095612Silvery flower (tetraploid) 331.742
CNS0095613Golden flower (tetraploid) 124.055
CNS0095614Golden flower (tetraploid) 231.739
CNS0095615Golden flower (tetraploid) 327.353
CRA001975CRR073297Stem 124.874
CRR073298Stem 223.773
CRR073299Stem 319.874
CRR073300Leaf 119.850
CRR073301Leaf 220.247
CRR073302Leaf 316.569
CRR073303Juvenile bud 115.224
CRR073304Juvenile bud 211.423
CRR073305Juvenile bud 314.433
CRR073306Third green 18.032
CRR073307Third green 26.875
CRR073308Third green 38.954
CRR073309Second white 19.112
CRR073310Second white 211.963
CRR073311Second white 310.344
CRR073312Silver flowering 19.312
CRR073313Silver flowering 29.324
CRR073314Silver flowering 310.037
CRR073315Gold flowering 114.648
CRR073316Gold flowering 220.951
CRR073317Gold flowering 312.237
CRR073318Tawny withering 133.183
CRR073319Tawny withering 231.776
CRR073320Tawny withering 330.911