Gene detail

Detail information of GWHGAAZE000290

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU46514.1	1.2278E-148	hypothetical protein MIMGU_mgv1a010915mg [Erythranthe guttata]
Swissprot	tr\|O22768\|UNE12_ARATH	3E-118	Transcription factor UNE12
trEMBL	tr\|A0A022S2E7\|A0A022S2E7_ERYGU	5E-149	Uncharacterized protein {ECO:0000313\|EMBL:EYU46514.1}
TAIR10	AT4G02590.2	4E-78	basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000001	gene	5729952	5733612	+
GWHAAZE00000001	mRNA	5729952	5733612	+
GWHAAZE00000001	exon	5729952	5730419	+
GWHAAZE00000001	exon	5731533	5731652	+
GWHAAZE00000001	exon	5731817	5731882	+
GWHAAZE00000001	exon	5732664	5732729	+
GWHAAZE00000001	exon	5732859	5732936	+
GWHAAZE00000001	exon	5733373	5733612	+
GWHAAZE00000001	CDS	5729952	5730419	+
GWHAAZE00000001	CDS	5731533	5731652	+
GWHAAZE00000001	CDS	5731817	5731882	+
GWHAAZE00000001	CDS	5732664	5732729	+
GWHAAZE00000001	CDS	5732859	5732936	+
GWHAAZE00000001	CDS	5733373	5733612	+

Transcript Sequence
>GWHTAAZE000290 TACTTATACGCTCTAATTTCTTTCAATTTCCATTTGAAACTTTCACCAGTCGATGCTCTTTCAAAATCCCAACTTCTCAAAGCTTTCGCACCCAAATCCGCACCACTCGGCCGACTACTAGCCATCATGGCTAACAACTCCTCCGACGGAACGGCCGACGACTTCTTCGAGCAAATCCTTGGGTTTCCGACTTACGCTGGAGCCTCCGACGCCAATTTGGCGGGAAGCGGGGCTCCGATGCTGTTGCAGCTGAGCTCCGGTGACGGCTCCGGTGGTAGTATTGGCGGAGGAGCTGGTGTTTCCGGTGGAGGAAGTGGATTTCATTTCCCGTTAGGGTTGAGTTTGGAGCAGGGGAAAGGTGGAGGAGGAGGAGGAGGAGGAGGTTTTCTCAAGATGGATGAGGACACTGGGGGAGGGAGGCGGTTCCGTGATGATGTTGTTGATAGTAGAGGTTCTTCTGTTAGAACTGGGTTCAATGCACAGCCAATGTCAAGTACAGTTCCCACAATGCCACATCCACCTGCAATCCGCCCAAGAGTGAGAGCTAGAAGAGGTCAGGCTACTGATCCCCACAGCATTGCTGAGAGGTTACGCAGAGAAAGAATAGCAGAAAGGATTAGGGCGTTGCAAGAACTGGTTCCTAGTGTCAGCAAGACAGATAGAGCTACCATGCTGGATGAAGTTGTGGACTATGTGAAGTTCTTAAGGCTTCAAGTGAAGGTGTTGAGCATGAGTAGATTGGGCGGTGCTGGGGCTGTGGCCCCGCTTGTGACAGACATCCCAATACTGTCAGTTGAGGAAGACGGTAGTGAAGGCGGAAGAAACCAGCCTGCATGGGAGAAATGGTCAAATGATGGGACAGAACGACAAGTAGCTAAACTAATGGAAGAAAATGTAGGGGCTGCAATGCAATTCCTTCAGTCCAAGGCACTCTGCATCATGCCTATTTCGCTCGCCTCTGCAATTTACCACACACAATCTCCAGATTCCACCACGCTTGTTAAACCCGAAACGAATTCCTCATCTAACATATCCTAG

Network for GWHGAAZE000290

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00010.27	HLH	191	235	3.20E-08

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0046983	molecular_function	protein dimerization activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	60.044
	SRR3591706	second leaf	25.032
	SRR3591707	mature leaf	28.584
	SRR3591708	Shoot apex	35.398
	SRR3591709	Stem	68.603
	SRR3591710	White floral bud	17.281
	SRR3591711	White flower	10.466
	SRR3591712	Green floral bud	14.442
	SRR3591713	Yellow flower	6.459
SRP173429	SRR8316895	Juvenile bud stage	8.308
	SRR8316896	Juvenile bud stage	8.629
	SRR8316897	Juvenile bud stage	3.705
	SRR8316894	Third green stage	5.261
	SRR8316900	Third green stage	15.836
	SRR8316901	Third green stage	12.250
	SRR8316898	Complete white stage	5.378
	SRR8316899	Complete white stage	23.751
	SRR8316903	Complete white stage	10.609
	SRR8316902	Silver flowering stage	3.693
	SRR8316904	Silver flowering stage	4.413
	SRR8316905	Silver flowering stage	3.068
	SRR8316906	Gold flowering stage	10.225
	SRR8316907	Gold flowering stage	12.422
	SRR8316908	Gold flowering stage	7.871
SRP132670	SRR6706286	Control	18.028
	SRR6706287	Light intensity 50%	15.238
	SRR6706288	Light intensity 20%	14.669
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.113
	CNS0095593	Slightly white alabastrum(diploid) 2	7.119
	CNS0095594	Slightly white alabastrum(diploid) 3	5.715
	CNS0095595	Whole white alabastrum(diploid) 2	5.686
	CNS0095596	Whole white alabastrum(diploid) 3	4.930
	CNS0095597	Whole white alabastrum(diploid) 4	6.196
	CNS0095598	Silvery flower (diploied) 1	12.425
	CNS0095599	Silvery flower (diploied) 2	8.438
	CNS0095600	Silvery flower (diploied) 3	7.957
	CNS0095601	Golden flower (diploid) 1	15.273
	CNS0095602	Golden flower (diploid) 2	13.951
	CNS0095603	Golden flower (diploid) 3	13.151
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.232
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.734
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.035
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.339
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.229
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.879
	CNS0095610	Silvery flower (tetraploid) 1	8.398
	CNS0095611	Silvery flower (tetraploid) 2	7.741
	CNS0095612	Silvery flower (tetraploid) 3	4.963
	CNS0095613	Golden flower (tetraploid) 1	2.935
	CNS0095614	Golden flower (tetraploid) 2	7.995
	CNS0095615	Golden flower (tetraploid) 3	1.602
CRA001975	CRR073297	Stem 1	18.689
	CRR073298	Stem 2	16.652
	CRR073299	Stem 3	20.316
	CRR073300	Leaf 1	20.680
	CRR073301	Leaf 2	17.997
	CRR073302	Leaf 3	21.241
	CRR073303	Juvenile bud 1	18.790
	CRR073304	Juvenile bud 2	18.485
	CRR073305	Juvenile bud 3	22.583
	CRR073306	Third green 1	3.569
	CRR073307	Third green 2	2.928
	CRR073308	Third green 3	5.022
	CRR073309	Second white 1	2.820
	CRR073310	Second white 2	6.744
	CRR073311	Second white 3	2.367
	CRR073312	Silver flowering 1	1.599
	CRR073313	Silver flowering 2	1.632
	CRR073314	Silver flowering 3	1.972
	CRR073315	Gold flowering 1	19.339
	CRR073316	Gold flowering 2	24.534
	CRR073317	Gold flowering 3	23.112
	CRR073318	Tawny withering 1	38.947
	CRR073319	Tawny withering 2	23.352
	CRR073320	Tawny withering 3	39.305